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HPI
The UniProtKB/Swiss-Prot Human Proteome Initiative |
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HPI Status report
UniProtKB/Swiss-Prot Release 56.2 of 23-Sep-2008: 398181 entries
(Release statistics)
Total number of manually annotated mammalian entries in UniProtKB/Swiss-Prot: 63,578
Total number of manually annotated HUMAN entries in UniProtKB/Swiss-Prot: 20,327
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
13,524 |
33 |
0.67 |
7,143 |
35% |
| Variants (disease mutations and polymorphisms): |
46,198 |
1305 |
2.27 |
8,989 |
44% |
| Post-translational modifications (experimentally proven or potential): |
59,237 |
303 |
2.91 |
11,204 |
55% |
| References to published articles: |
102,928 / 44,900 |
176 |
5.06 |
20,094 |
98% |
| Comment blocks: |
110,547 / 40,383 |
32 |
5.44 |
19,603 |
96% |
| Feature lines: |
476,772 |
4049 |
23.46 |
20,327 |
100% |
| Cross-references: |
| EMBL protein_ids: |
129,735 / 129,212 |
723 |
6.38 |
20,201 |
99% |
| InterPro: |
50,005 / 6,420 |
23 |
2.46 |
16,775 |
82% |
| PDB (3D-structures): |
27,766 / 26,182 |
464 |
1.37 |
3,406 |
16% |
| MIM catalog of human genes and genetic disorders: |
15,276 / 14,389 |
15 |
0.75 |
12,142 |
59% |
| HGNC gene nomenclature: |
19,086 / 18,957 |
14 |
0.94 |
18,930 |
93% |
Total number of manually annotated MOUSE entries in UniProtKB/Swiss-Prot: 15,925
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
7,207 |
20 |
0.45 |
4,271 |
26% |
| Variants (disease mutations and polymorphisms): |
1,160 |
37 |
0.07 |
361 |
2% |
| Post-translational modifications (experimentally proven or potential): |
49,261 |
216 |
3.09 |
9,484 |
59% |
| References to published articles: |
46,641 / 17,333 |
49 |
2.93 |
15,683 |
98% |
| Comment blocks: |
79,766 / 31,800 |
22 |
5.01 |
15,560 |
97% |
| Feature lines: |
244,761 |
612 |
15.37 |
15,925 |
100% |
| Cross-references: |
| EMBL protein_ids: |
67,787 / 67,735 |
111 |
4.26 |
15,787 |
99% |
| InterPro: |
40,916 / 6,251 |
18 |
2.57 |
13,901 |
87% |
| PDB (3D-structures): |
4,618 / 4,316 |
232 |
0.29 |
878 |
5% |
| Mouse Genome Informatics: |
15,757 / 15,691 |
12 |
0.99 |
15,705 |
98% |
Total number of manually annotated RAT entries in UniProtKB/Swiss-Prot: 7,172
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
1,367 |
18 |
0.19 |
767 |
10% |
| Variants (disease mutations and polymorphisms): |
238 |
12 |
0.03 |
113 |
1% |
| Post-translational modifications (experimentally proven or potential): |
25,059 |
204 |
3.49 |
4,779 |
66% |
| References to published articles: |
14,955 / 9,287 |
25 |
2.09 |
6,746 |
94% |
| Comment blocks: |
36,784 / 17,550 |
24 |
5.13 |
7,035 |
98% |
| Feature lines: |
105,278 |
314 |
14.68 |
7,172 |
100% |
| Cross-references: |
| EMBL protein_ids: |
14,634 / 14,619 |
152 |
2.04 |
7,097 |
98% |
| InterPro: |
19,534 / 4,587 |
19 |
2.72 |
6,460 |
90% |
| PDB (3D-structures): |
2,624 / 2,505 |
116 |
0.37 |
393 |
5% |
| Rat Genome Database: |
7,052 / 7,032 |
3 |
0.98 |
7,047 |
98% |
For more detailed information about the taxonomic distribution of UniProtKB/Swiss-Prot
entries, see the corresponding section in the Release
statistics.
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